PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK24833.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family Trihelix
Protein Properties Length: 559aa    MW: 63345.4 Da    PI: 7.5135
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK24833.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix94.69.5e-30115200187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+y+k+keg+ +r  ++ +++++f+qlea
  KFK24833.1 115 RWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYRKTKEGKAGR--QDGKHYRFFRQLEA 200
                 8*************************************999*****************************98..55667*******85 PP

2trihelix64.72e-20391476182
    trihelix   1 rWtkqevlaLiearremeerlrr...gklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                 +W +qe+ +L+e+r++m++++++   g++++ lWee+++k+ + gf +rs+  Ckekwe++++ ++k+k++ +k+++e+ss+c  +
  KFK24833.1 391 CWNEQEIIKLMEIRTSMDSAFQEilgGCSDEFLWEEIAAKLTQLGFdQRSALLCKEKWEWISNGMRKEKKQINKKRKENSSSCGVY 476
                 7*********************98889*******************999********************99999989999998655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.98114173IPR017877Myb-like domain
CDDcd122034.17E-19115180No hitNo description
PfamPF138372.4E-20115201No hitNo description
CDDcd122032.41E-18390459No hitNo description
PfamPF138372.6E-12390476No hitNo description
PROSITE profilePS500906.121392449IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0010200Biological Processresponse to chitin
GO:0046621Biological Processnegative regulation of organ growth
GO:0048442Biological Processsepal development
GO:0048498Biological Processestablishment of petal orientation
GO:0090428Biological Processperianth development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0042803Molecular Functionprotein homodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 559 aa     Download sequence    Send to blast
MDDHHHQYGI PELRQLMKTG GRTTTTASPS TSSHFPSDFF GFNLAPAAPP QHHRLHQFTT  60
DQEMGFLPRG VHGLGGNSSN LNASTSGGGF SGFLEGGGGF GGGMGGGGDG GGTGRWPRQE  120
TLTLLEIRSR LDHKFKEANQ KGPLWDEVSR IMSEEHGYQR SGKKCREKFE NLYKYYRKTK  180
EGKAGRQDGK HYRFFRQLEA LYGDSNNLVS CPSHNTQFMS NALHGFHTQN TMNVTTTTSN  240
IHNVDSSVHG FHHQSLSLSN NYNSSELELM TSSSEGNDSS TIRKKRSWKA KIKEFIDMNM  300
KRLIERQDLW LEKLTKVIED KEEQRMLKEE EWRKIEAARI DKEHKFWAKE RERMEARDVA  360
VIEALQYLTG KPLIKPLCSS PEERINGSGS CWNEQEIIKL MEIRTSMDSA FQEILGGCSD  420
EFLWEEIAAK LTQLGFDQRS ALLCKEKWEW ISNGMRKEKK QINKKRKENS SSCGVYYPRT  480
EENAIYNNQE RGYNDNDQHH QMNEQGNVGS STSNANANAG NPSGAMAANT NCFPFFMGDG  540
DQNLWESYGL RLSKGDQNQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY5557280.0AY555728.1 Arabidopsis thaliana trihelix transcription factor (PETAL LOSS) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006398825.10.0hypothetical protein EUTSA_v10013048mg
SwissprotQ9LZS00.0PTL_ARATH; Trihelix transcription factor PTL
TrEMBLA0A087G4N10.0A0A087G4N1_ARAAL; Uncharacterized protein
STRINGAT5G03680.10.0(Arabidopsis thaliana)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.10.0Trihelix family protein